Open Positions

We are working on several exciting projects in the general area of systems biology and time series expression analysis. Most of our work is in collaboration with leading biological labs. Many of the computational tools we develop are publicly available and some are currently used by hundreds of researchers around the world. We are looking for new individuals to join our group. Specifically:

People

Ziv Bar-Joseph
Principal Investigator
zivbj "at" cs.cmu.edu
Tel: 412-268 8595

Allyson Ricarte
HuBMAP project manager
aricarte "at" andrew.cmu.edu
Tel: 412-268-4206
Fax: 412-268-2977

Matthew Ruffalo
Systems Scientist, CBD
mruffalo "at" andrew.cmu.edu



Siwei Xu
Software engineer
siweixu "at" andrew.cmu.edu

Nikhil Swaminathan
Research Software Engineer
nswamin1 "at" Andrew.cmu.edu

Monica Dayao
PhD student, CBD
mdayao "at" andrew.cmu.edu



Haotian Teng
PhD student, CBD
haotiant "at" andrew.cmu.edu

Nam Nguyen
Lane Fellow (Postdoc)
namn "at" andrew.cmu.edu

Dongshunyi Li
PhD Student (CBD)
dongshul "at" andrew.cmu.edu



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Sean Donahue
Research Programmer (HuBMAP)
seandona "at" andrew.cmu.edu

Alex (Qi) Song
Postdoc (Postdoc)
qisong "at" andrew.cmu.edu




Past Group Members

Saket Navlakha
Associate Professor
Cold Spring Harbor Laboratory

Anthony Gitter
Assistant Professor
University of Wisconsin-Madison

Xin He
Assistant Professor
University of Chicago



Marcel Schulz
Professor
Frankfurt University

Hai-Son Le
Analyst
Sunrise Futures LLC

Shan Zhong
Principal Scientist
GSK

Guy Zinman
Director of Life Sciences at SparkBeyond

Yanjun Qi
Associate Professor
UVA Computer Science

Henry (Tienho) Lin
Senior Data Scientist
Avetta

Yong Lu
Staff Scientist
NIH

Jason Ernst
Associate Professor
UCLA

Yanxin Shi
Facebook

Ercument Cicek
Assistant Professor
Bilkent University

Aaron Wise
Director of Bioinformatics
Encodia

Yan Xia
Facebook

Siddhartha Jain
Applied Scientist
Amazon

Mondira Ray
MD Resident
Seattle Children's Hospital

Sabrina Rashid
Sr. Deep Learning/AI Engineer
Illumina

Hamim Zafar
Assistant Professor
IIT Kanpur

Jun Ding
Assistant Professor
McGill University

Ye Yuan
Assistant Prof.
Shanghai Jiao Tong University


Jose Lugo-Martinez
Assistant Prof. The University of Puerto Rico, Mayaguez (UPRM)

Amir Alavi
ML Scientist, Seer